Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929546.1_cds_XP_016476821.1_68610
CDS Infomation

[gene=LOC107798358] [db_xref=GeneID:107798358] [protein=3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic-like] [protein_id=XP_016476821.1] [location=complement(join(13356..13423,13882..13948,14041..14142,14828..14941,15058..15231,15373..15804,16332..16678,17866..18007))] [gbkey=CDS]
Sequence

ATGACTAGTATTACTGGTACTTGTTCTTCTGCTTTAATTTTGAAGCAGAGAGAATCAGGA
ACTTATTTGTTTCAATACAATGGGCTTAGAGCAATTGAAAGTATGCAAATGCCAGTGGAG
TCTAATTCCTGGAAACCAAAAGCTGTAAAATGTGGAAGAATCAAGGCCATGGCTTCAGCT
CCCAAAAGAGAAAAGGACCCAAAGAAAAGGATTGTCATAAGTGGAATGGGCCTTGTTTCA
GTCTTTGGAAGTGATATCGACAATTTCTATAATAAACTTCTCGAGGGACAGAGTGGAATC
ACTTTGATCGACAGATTTGATGCCTCAAATTACTCTGTTAGGTTTGCAGGACAGATTCGT
GATTTCTCATCCGTAGGCTACATAGACGGGAAGAATGATCGTCGTCTAGATGATTGTTGG
AGGTATTGTCTCGTTGCTGGCAAGAAAGCCCTTAATGATGCCAATCTTGGTCAAGAAGTT
CTTGAAACTATGGACAAAACAAGAATCGGTGTCTTAGTTGGGACCGGGATGGGAGGATTA
ACAGCTTTCAGCAGTGGAGTGGAATCCTTAGTTCAGAAAGGATACAAGAAAATCAGTCCA
TTTTTCATCCCTTACTCTATCACCAATATGGGATCAGCATTGTTAGCTATAGATACAGGA
CTAATGGGACCTAATTACTCCATTTCAACGGCTTGTGCAACCGCAAACTACTGCTTCTAT
GCGGCTGCAAATCACATTAGAAGGGGTGAAGCAGATATTATGGTAGCAGGTGGGACGGAA
GCTGCAATCATGCCTACTGGTGTTGGCGGCTTCATAGCTTGTCGTGCCTTATCTCAAAGA
AATGACGAACCACACAAGGCGTCAAGGCCGTGGGACAAGAATCGTGATGGTTTTGTCATG
GGCGAAGGTTCTGGTGTCCTGGTAATGGAAAGTCTGGAGCACGCGTTGAAAAGAGGTGCT
AATATTATAGCAGAATACTTGGGAGGTGCTGTCACTTGTGATGCTCATCACATGACTGAT
CCTCGTTCCGATGGGCTTGGGGTTTCATCTTGCATAACCAAAAGTTTGGAAGATTCGGGC
GTTTCCCTTGAAGAGGTGAATTACATTAATGCACATGCAACATCAACCCTTGCTGGAGAT
TTGGCAGAGGTCAATGCGATCAAGAAAGTCTTTAAGGATACTTCAGAGATTAAGATGAAC
GGAACAAAGTCAATGATTGGGCATGGACTCGGGGCTGCTGGTGGACTAGAAGCGATTGCA
ACGATCAAAGCAATAACAACAGGGTGGCTACATCCAACTATTAACCAATATGATTTGGAA
CCTCAGGTTACAATTGACACTGTACCGAATGTGAAGAAACAACATGAAGTGAATGTTGGT
ATTTCCAACTCATTTGGATTTGGAGGTCATAATTCAGTGGTTGTTTTCGCGCCTTACAAC
CCTTAA

Peptide Sequence

PEP ID

XP_016476821.1
PEP Infomation

PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic-like [Nicotiana tabacum]
Sequence

MTSITGTCSSALILKQRESGTYLFQYNGLRAIESMQMPVESNSWKPKAVKCGRIKAMASA
PKREKDPKKRIVISGMGLVSVFGSDIDNFYNKLLEGQSGITLIDRFDASNYSVRFAGQIR
DFSSVGYIDGKNDRRLDDCWRYCLVAGKKALNDANLGQEVLETMDKTRIGVLVGTGMGGL
TAFSSGVESLVQKGYKKISPFFIPYSITNMGSALLAIDTGLMGPNYSISTACATANYCFY
AAANHIRRGEADIMVAGGTEAAIMPTGVGGFIACRALSQRNDEPHKASRPWDKNRDGFVM
GEGSGVLVMESLEHALKRGANIIAEYLGGAVTCDAHHMTDPRSDGLGVSSCITKSLEDSG
VSLEEVNYINAHATSTLAGDLAEVNAIKKVFKDTSEIKMNGTKSMIGHGLGAAGGLEAIA
TIKAITTGWLHPTINQYDLEPQVTIDTVPNVKKQHEVNVGISNSFGFGGHNSVVVFAPYN
P

Transcript Sequence

Gene sequence data has not been registered.